USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9H4G4 USC-OGP 2-DE database:  Q9H4G4 Q9H4G4 General information about the entry View entry in simple text format Entry name GAPR1_HUMAN Primary accession number Q9H4G4 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Golgi-associated plant pathogenesis-related protein 1; Short=GAPR-1; Short=Golgi-associated PR-1 protein; AltName: Full=Glioma pathogenesis-related protein 2; Short=GliPR 2;. Gene name Name=GLIPR2 Synonyms=C9orf19, GAPR1 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1352: pI=8.49; Mw=13705 Cross-references UniProtKB/Swiss-Prot Q9H4G4; GAPR1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name GAPR1_HUMAN Primary accession number Q9H4G4 Secondary accession number(s) Q5VZR1 Q8N2S6 Q8WWC9 Q8WX36 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 123) Name and origin of the protein Description RecName: Full=Golgi-associated plant pathogenesis-related protein 1; Short=GAPR-1; Short=Golgi-associated PR-1 protein; AltName: Full=Glioma pathogenesis-related protein 2; Short=GliPR 2; Gene name Name=GLIPR2 Synonyms=C9orf19, GAPR1 Encoded on Name=GLIPR2; Synonyms=C9orf19, GAPR1 Keywords 3D-structure; Coiled coil; Complete proteome; Direct protein sequencing; Golgi apparatus; Lipoprotein; Membrane; Myristate; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AJ011129; CAC12812.1; -; mRNA EMBL AY039756; AAK83460.1; -; mRNA EMBL AK074488; BAC11019.1; -; mRNA EMBL AK075091; BAC11395.1; -; mRNA EMBL AL158830; CAH73678.1; -; Genomic_DNA EMBL BC017918; AAH17918.1; -; mRNA CCDS CCDS6598.1; -; . RefSeq NP_071738.1; NM_022343.3; . UniGene Hs.493819; -; . PDB 1SMB; X-ray; 1.55 A; A=1-154 PDB 4AIW; X-ray; 1.50 A; A=1-154 PDBsum 1SMB; -; . PDBsum 4AIW; -; . ProteinModelPortal Q9H4G4; -; . SMR Q9H4G4; -; . BioGrid 127417; 7; . DIP DIP-60127N; -; . IntAct Q9H4G4; 4; . STRING 9606.ENSP00000367196; -; . DrugBank DB03661; Cysteinesulfonic Acid; . iPTMnet Q9H4G4; -; . PhosphoSitePlus Q9H4G4; -; . SwissPalm Q9H4G4; -; . EPD Q9H4G4; -; . MaxQB Q9H4G4; -; . PaxDb Q9H4G4; -; . PeptideAtlas Q9H4G4; -; . PRIDE Q9H4G4; -; . TopDownProteomics Q9H4G4; -; . Ensembl ENST00000377960; ENSP00000367196; ENSG00000122694; . GeneID 152007; -; . KEGG hsa:152007; -; . UCSC uc003zyz.5; human; . CTD 152007; -; . DisGeNET 152007; -; . GeneCards GLIPR2; -; . HGNC HGNC:18007; GLIPR2; . HPA HPA029478; -; . MIM 607141; gene; . neXtProt NX_Q9H4G4; -; . OpenTargets ENSG00000122694; -; . PharmGKB PA164720283; -; . eggNOG KOG3017; Eukaryota; . eggNOG COG2340; LUCA; . GeneTree ENSGT00390000020276; -; . HOVERGEN HBG051701; -; . InParanoid Q9H4G4; -; . OMA RKQHGVP; -; . OrthoDB EOG091G0QVD; -; . PhylomeDB Q9H4G4; -; . TreeFam TF313138; -; . ChiTaRS GLIPR2; human; . EvolutionaryTrace Q9H4G4; -; . GenomeRNAi 152007; -; . PRO PR:Q9H4G4; -; . Proteomes UP000005640; Chromosome 9; . Bgee ENSG00000122694; -; . CleanEx HS_GLIPR2; -; . ExpressionAtlas Q9H4G4; baseline and differential; . Genevisible Q9H4G4; HS; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0000139; C:Golgi membrane; IDA:UniProtKB; . GO GO:0042803; F:protein homodimerization activity; IDA:UniProtKB; . GO GO:0010634; P:positive regulation of epithelial cell migration; IDA:UniProtKB; . GO GO:0010718; P:positive regulation of epithelial to mesenchymal transition; IDA:UniProtKB; . GO GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; IDA:UniProtKB; . CDD cd05382; SCP_GAPR-1_like; 1; . Gene3D 3.40.33.10; -; 1; . InterPro IPR001283; Allrgn_V5/Tpx1; . InterPro IPR018244; Allrgn_V5/Tpx1_CS; . InterPro IPR014044; CAP_domain; . InterPro IPR034113; SCP_GAPR1-like; . PANTHER PTHR10334; PTHR10334; 1; . Pfam PF00188; CAP; 1; . PRINTS PR00837; V5TPXLIKE; . SMART SM00198; SCP; 1; . SUPFAM SSF55797; SSF55797; 1; . PROSITE PS01009; CRISP_1; 1; .

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• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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